+Marker Data: EMB01K18

Crop eggplant
Population AL2010
Linkage Group E_08
Marker Type SSR
Map Position 54.7
Annotation
Source Name EMB01K18
Source Type genomic
Source Sequence CCATCATAGAAACGTTATCATCGGAAGTAGTATTGTTCCA CAAATTCATGGTCGGTAAGCTGTAATCAGTCATTCCATAA ACACAAGTGGGTAAAAATGGTGGAGAGAGAGAGGGAGAGA TAAGCGATGAGGGGTGGCGGAGAGATATGAGAGAGAGCAA AATGATTTGGTTTTGGGTTCAGATTGGAATTGGAGTTTGG CTTTTATTTGAGGTGAATTTGAGCTGAATTTAGGAAAGAA AGAGGACAAAGCCTGGCGGGTTCCACG
Developer NIVTS
Document Nunome et al. (2009) Development of SSR markers derived from SSR-enriched genomic library of eggplant (Solanum melongena L.). Theor. Appl.Genet. 119: 1143-1153

motif (GA)5GG(GA)3
PCR product (bp) 157
fwd primer
fwd primer seq. cacaaattcatggtcggtaagctg
rev primer
rev primer seq. ctccaattccaatctgaacccaaa
fluor. primer
dye FAM
fluor. Primer seq. FAM-CACAAATTCATGGTCGGTAAGCTG
PCR condition 94C_3min->(94C_30s->65C_60s,-1C/cyc->72C_60s)x10->(94C_30s->55C_60s->72C_60s)x30->75C_5min->10C
polymerase Roche Taq

Line allele-1 allele-2
PI 286106

Population Linkage Group Position
AL2010 E_08 54.7
ALF2 AL08 68.2
LWA2010 LWA_08 56.54
LWAE2012 E_08 57.076
N28F2 E_01 113.7

DB Program Definition E-Value

EST Name Species Strain