Crop | bunching_onion |
---|---|
Population | DJF2 |
Linkage Group | Chr2a |
Marker Type | SSR |
Map Position | 52.7 |
Annotation | |
Source Name | AMS14 |
Source Type | onion_gDNA |
Source Sequence | |
Developer | |
Document | Fischer and Bachmann (2000) Theor Appl Genet 101:153-164 |
motif | (ca)28(ta)4 |
---|---|
PCR product (bp) | 169 |
fwd primer | AMS14-F |
fwd primer seq. | cccctgagtaaattcaaaatcc |
rev primer | AMS14-R |
rev primer seq. | tccttagtataatttcggggtaac |
fluor. primer | AMS14-F(FAM) |
dye | FAM |
fluor. Primer seq. | FAM-cccctgagtaaattcaaaatcc |
PCR condition | 94C_2min->(94C_30s->60C_30s,-1C/cyc->72C_30s)x10->(94C_30s->50C_30s->72C_30s)x35->72C_4min->10C |
polymerase | Toyobo rTaq DNA polymerase |
Genebank No. | |
annotation | |
similar marker | |
product size in J | 150 |
product size in Kaizuka-Wase | |
product size in Iki-White | 160+170 |
product size in Tender Pole | 140 |
Line | allele-1 | allele-2 |
---|---|---|
C1s-11s-25s-7 | ||
Cho1s-1s-2s-2s-8s | 144 | 144 |
D1s-15s-10s-8 | 150 | 150 |
F1s-7s-17s-3s-1 | ||
J1s-14s-23s-9 | 154 | 154 |
K1s-5s-2s-2s-4s-5 | 144 | 144 |
Chiang_mai | ||
Kaizuka_Wase |
Population | Linkage Group | Position |
---|---|---|
DJF2 | Chr2a | 52.7 |
DB | Program | Definition | E-Value |
---|
EST Name | Species | Strain |
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