Crop | bunching_onion |
---|---|
Population | DJF2 |
Linkage Group | Chr7b |
Marker Type | SSR |
Map Position | 77.7 |
Annotation | |
Source Name | AB499334 |
Source Type | genomic |
Source Sequence | |
Developer | NIVTS |
Document | Ohara et al. (2005) Euphytica 144:255-263 |
motif | (ta)3ca(ac)12a(ta)5tg(ca)3 |
---|---|
PCR product (bp) | 213 |
fwd primer | AFS140_2-F |
fwd primer seq. | cgtagcggatggtcacaaga |
rev primer | AFS140_2-R |
rev primer seq. | tggacctggaggcctagact |
fluor. primer | AFS140-2-F(NED) |
dye | NED |
fluor. Primer seq. | NED-cgtagcggatggtcacaaga |
PCR condition | 94C_2min->(94C_30s->60C_30s,-1C/cyc->72C_30s)x10->(94C_30s->50C_30s->72C_30s)x35->72C_4min->10C |
polymerase | Toyobo rTaq DNA polymerase |
Genebank No. | AB499334 |
annotation | |
similar marker | |
product size in J | 200 |
product size in Kaizuka-Wase | |
product size in Iki-White | 200 |
product size in Tender Pole | 200 |
Line | allele-1 | allele-2 |
---|---|---|
C1s-11s-25s-7 | 209 | 225 |
Cho1s-1s-2s-2s-8s | ||
D1s-15s-10s-8 | 219 | 219 |
F1s-7s-17s-3s-1 | 207 | 207 |
J1s-14s-23s-9 | 199 | 199 |
K1s-5s-2s-2s-4s-5 | 217 | 217 |
Chiang_mai | ||
Kaizuka_Wase |
Population | Linkage Group | Position |
---|---|---|
DJF2 | Chr7b | 77.7 |
FA | 7c | 14.1 |
P1 | J09 | 7.0 |
P2 | D09 | 0.0 |
SaT03 | 7b | 26.6 |
DB | Program | Definition | E-Value |
---|
EST Name | Species | Strain |
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