+Marker Data: AFS123_2

Crop bunching_onion
Population DJF2
Linkage Group Chr1b
Marker Type SSR
Map Position 43.3
Annotation
Source Name AB499332
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2008) Theor Appl Genet 117:1213-1223

motif (at)3(ta)4(at)3ttatacataca(tg)9tc(ta)9ttgtaaca(ta)3
PCR product (bp) 397
fwd primer AFS123_2-F
fwd primer seq. tctccagatttttcctaagctct
rev primer AFS123_2-R
rev primer seq. tgggatttacatcgcaacat
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->60C_30s,-1C/cyc->72C_30s)x10->(94C_30s->50C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499332
annotation
similar marker
product size in J
product size in Kaizuka-Wase
product size in Iki-White
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7
Cho1s-1s-2s-2s-8s
D1s-15s-10s-8 387 387
F1s-7s-17s-3s-1
J1s-14s-23s-9 397 397
K1s-5s-2s-2s-4s-5
Chiang_mai
Kaizuka_Wase

Population Linkage Group Position
DJF2 Chr1b 43.3

DB Program Definition E-Value

EST Name Species Strain