+Marker Data: AFS104_2

Crop bunching_onion
Population DJF2
Linkage Group Chr3a
Marker Type SSR
Map Position 52.5
Annotation
Source Name AB499327
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2008) Theor Appl Genet 117:1213-1223

motif (ta)3t(ac)7
PCR product (bp) 216
fwd primer AFS104_2-F
fwd primer seq. actcaaggaaacacgtatgccact
rev primer AFS104_2-R
rev primer seq. tcgcccttttagattcatttcc
fluor. primer AFS104_2-F(FAM)
dye FAM
fluor. Primer seq. FAM-actcaaggaaacacgtatgccact
PCR condition 94C_2min->(94C_30s->60C_30s,-1C/cyc->72C_30s)x10->(94C_30s->50C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499327
annotation
similar marker
product size in J
product size in Kaizuka-Wase
product size in Iki-White
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7
Cho1s-1s-2s-2s-8s
D1s-15s-10s-8 210 210
F1s-7s-17s-3s-1
J1s-14s-23s-9 216 216
K1s-5s-2s-2s-4s-5
Chiang_mai
Kaizuka_Wase

Population Linkage Group Position
DJF2 Chr3a 52.5

DB Program Definition E-Value

EST Name Species Strain