+Marker Data: AFS042

Crop bunching_onion
Population DJF2
Linkage Group Chr3b
Marker Type SSR
Map Position 58.5
Annotation
Source Name AB499320
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2008) Theor Appl Genet 117:1213-1223

motif (ac)9a(ta)7
PCR product (bp) 251
fwd primer AFS042-F
fwd primer seq. atgcttaaatcatcaacacacacac
rev primer AFS042-R
rev primer seq. accatttttaatctcaagggaagat
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->60C_30s,-1C/cyc->72C_30s)x10->(94C_30s->50C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499320
annotation
similar marker
product size in J 240
product size in Kaizuka-Wase 240
product size in Iki-White
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7
Cho1s-1s-2s-2s-8s
D1s-15s-10s-8 253 253
F1s-7s-17s-3s-1
J1s-14s-23s-9 251 251
K1s-5s-2s-2s-4s-5
Chiang_mai
Kaizuka_Wase

Population Linkage Group Position
DJF2 Chr3b 58.5

DB Program Definition E-Value

EST Name Species Strain