+Marker Data: AFRT08C02

Crop bunching_onion
Population DJF2
Linkage Group Chr6a
Marker Type SSR
Map Position 61.1
Annotation
Source Name AB499526
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2008) Theor Appl Genet 117:1213-1223

motif (ac)8a(ta)7
PCR product (bp) 292
fwd primer AFRT08C02-U
fwd primer seq. attccttaacttcaattctatgggg
rev primer AFRT08C02-L
rev primer seq. gtttatccaaattacggctttgggc
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499526
annotation
similar marker
product size in J 300
product size in Kaizuka-Wase
product size in Iki-White
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7
Cho1s-1s-2s-2s-8s
D1s-15s-10s-8 200 200
F1s-7s-17s-3s-1
J1s-14s-23s-9 204 204
K1s-5s-2s-2s-4s-5
Chiang_mai - -
Kaizuka_Wase

Population Linkage Group Position
DJF2 Chr6a 61.1

DB Program Definition E-Value

EST Name Species Strain