+Marker Data: AFRA11H08

Crop bunching_onion
Population DJF2
Linkage Group Chr2a
Marker Type SSR
Map Position 174.2
Annotation
Source Name AB499521
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2008) Theor Appl Genet 117:1213-1223

motif (at)3ctagattct(ta)3tggtcc(tg)16taaatggaa(gt)3
PCR product (bp) 113
fwd primer AFRA11H08-U
fwd primer seq. agatggggagttttgttctgttttct
rev primer AFRA11H08-L
rev primer seq. gtttatgcacatgaacacacttccattt
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499521
annotation
similar marker
product size in J 100
product size in Kaizuka-Wase 90+100
product size in Iki-White
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7
Cho1s-1s-2s-2s-8s
D1s-15s-10s-8 101 101
F1s-7s-17s-3s-1
J1s-14s-23s-9 115 115
K1s-5s-2s-2s-4s-5
Chiang_mai - -
Kaizuka_Wase

Population Linkage Group Position
DJF2 Chr2a 174.2

DB Program Definition E-Value

EST Name Species Strain