+Marker Data: AFRA03F03

Crop bunching_onion
Population DJF2
Linkage Group ChrX
Marker Type SSR
Map Position 62.8
Annotation
Source Name AB499514
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2008) Theor Appl Genet 117:1213-1223

motif (ac)10a(ta)4
PCR product (bp) 182
fwd primer AFRA03F03-U
fwd primer seq. atcgagggcaagaaagtatggttg
rev primer AFRA03F03-L
rev primer seq. gtttgaagacaaagtggctcagtgtcc
fluor. primer AFRA03F03-F(FAM)
dye FAM
fluor. Primer seq. FAM-atcgagggcaagaaagtatggttg
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499514
annotation
similar marker
product size in J
product size in Kaizuka-Wase
product size in Iki-White
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7
Cho1s-1s-2s-2s-8s 272 272
D1s-15s-10s-8 220 220
F1s-7s-17s-3s-1
J1s-14s-23s-9 220 230
K1s-5s-2s-2s-4s-5 262 262
Chiang_mai
Kaizuka_Wase

Population Linkage Group Position
DJF2 ChrX 62.8

DB Program Definition E-Value

EST Name Species Strain