+Marker Data: AFRA03E08

Crop bunching_onion
Population DJF2
Linkage Group Chr1b
Marker Type SSR
Map Position 22.7
Annotation
Source Name AB499513
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2008) Theor Appl Genet 117:1213-1223

motif (cg)3agcgtgc(ac)10a(ta)5
PCR product (bp) 181
fwd primer AFRA03E08-U
fwd primer seq. atacccactcatactcatgaaatagca
rev primer AFRA03E08-L
rev primer seq. gtttgcgggtatctaagtgtgttaggcg
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499513
annotation
similar marker
product size in J 170
product size in Kaizuka-Wase 170
product size in Iki-White
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7
Cho1s-1s-2s-2s-8s
D1s-15s-10s-8 200 200
F1s-7s-17s-3s-1
J1s-14s-23s-9 190 190
K1s-5s-2s-2s-4s-5
Chiang_mai
Kaizuka_Wase

Population Linkage Group Position
DJF2 Chr1b 22.7

DB Program Definition E-Value

EST Name Species Strain