+Marker Data: AFRA01G07

Crop bunching_onion
Population DJF2
Linkage Group Chr1a
Marker Type SSR
Map Position 39.7
Annotation
Source Name AB499512
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2008) Theor Appl Genet 117:1213-1223

motif (ac)13a(ta)3ttaaatacttatacac(at)3t(ta)3atgataaa(ta)3
PCR product (bp) 234
fwd primer AFRA01G07-U
fwd primer seq. agtttggtggtagatcatctcggt
rev primer AFRA01G07-L
rev primer seq. gtttgcacatgagcaggtagtgaaa
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499512
annotation
similar marker
product size in J 220
product size in Kaizuka-Wase 220
product size in Iki-White
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7
Cho1s-1s-2s-2s-8s
D1s-15s-10s-8 240 240
F1s-7s-17s-3s-1
J1s-14s-23s-9 230 230
K1s-5s-2s-2s-4s-5
Chiang_mai - -
Kaizuka_Wase

Population Linkage Group Position
DJF2 Chr1a 39.7

DB Program Definition E-Value

EST Name Species Strain