+Marker Data: AFC03F10

Crop bunching_onion
Population DJF2
Linkage Group Chr3a
Marker Type SSR
Map Position 35.6
Annotation
Source Name AB499501
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2008) Theor Appl Genet 117:1213-1223

motif (tct)3tcg(tct)6(ct)3c
PCR product (bp) 182
fwd primer AFC03F10-U
fwd primer seq. agttcttgatcgcttagagggctg
rev primer AFC03F10-L
rev primer seq. gtttgaaggcacaatgtatgcttcgcta
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499501
annotation
similar marker
product size in J 180+190
product size in Kaizuka-Wase 185
product size in Iki-White 190
product size in Tender Pole 180

Line allele-1 allele-2
C1s-11s-25s-7
Cho1s-1s-2s-2s-8s
D1s-15s-10s-8 190 190
F1s-7s-17s-3s-1
J1s-14s-23s-9 180 180
K1s-5s-2s-2s-4s-5
Chiang_mai 190 190
Kaizuka_Wase

Population Linkage Group Position
DJF2 Chr3a 35.6

DB Program Definition E-Value

EST Name Species Strain