+Marker Data: AFB221

Crop bunching_onion
Population DJF2
Linkage Group Chr1b
Marker Type SSR
Map Position 84.5
Annotation
Source Name AB499493
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2008) Theor Appl Genet 117:1213-1223

motif (ct)9at(ct)8
PCR product (bp) 142
fwd primer AFB221-F
fwd primer seq. acgacaggttgtgtgattgtgtg
rev primer AFB221-R
rev primer seq. gtttgaccgatgtaggatgattgtt
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499493
annotation
similar marker
product size in J 120+130
product size in Kaizuka-Wase 120
product size in Iki-White 110+120
product size in Tender Pole 90+120

Line allele-1 allele-2
C1s-11s-25s-7
Cho1s-1s-2s-2s-8s
D1s-15s-10s-8 140 140
F1s-7s-17s-3s-1
J1s-14s-23s-9 160 160
K1s-5s-2s-2s-4s-5
Chiang_mai
Kaizuka_Wase

Population Linkage Group Position
DJF2 Chr1b 84.5
SaT03 1b 46.8

DB Program Definition E-Value

EST Name Species Strain