Crop | bunching_onion |
---|---|
Population | DJF2 |
Linkage Group | Chr6a |
Marker Type | SSR |
Map Position | 114.1 |
Annotation | |
Source Name | AB499492 |
Source Type | genomic |
Source Sequence | |
Developer | NIVTS |
Document | Tsukazaki et al. (2008) Theor Appl Genet 117:1213-1223 |
motif | (tc)10a(ct)3 |
---|---|
PCR product (bp) | 110 |
fwd primer | AFB20G05-U |
fwd primer seq. | atccacaccgtaatccaactcctt |
rev primer | AFB20G05-L |
rev primer seq. | gtttaaaatgagcgttgttggctcg |
fluor. primer | |
dye | |
fluor. Primer seq. | |
PCR condition | 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C |
polymerase | Toyobo rTaq DNA polymerase |
Genebank No. | AB499492 |
annotation | |
similar marker | |
product size in J | 110 |
product size in Kaizuka-Wase | 90 |
product size in Iki-White | 110 |
product size in Tender Pole | 110 |
Line | allele-1 | allele-2 |
---|---|---|
C1s-11s-25s-7 | 103 | 103 |
Cho1s-1s-2s-2s-8s | 109 | 109 |
D1s-15s-10s-8 | 105 | 105 |
F1s-7s-17s-3s-1 | 107 | 107 |
J1s-14s-23s-9 | 107 | 107 |
K1s-5s-2s-2s-4s-5 | 109 | 109 |
Chiang_mai | 82 | 82 |
Kaizuka_Wase |
Population | Linkage Group | Position |
---|---|---|
DJF2 | Chr6a | 114.1 |
SaT03 | 6a | 56.0 |
DB | Program | Definition | E-Value |
---|
EST Name | Species | Strain |
---|