+Marker Data: AFB06C08

Crop bunching_onion
Population DJF2
Linkage Group Chr1a
Marker Type SSR
Map Position 120.7
Annotation
Source Name AB499484
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2007) Euphytica 157:83-94
motif (ag)3gg(ag)18
PCR product (bp) 140
fwd primer AFB06C08-U
fwd primer seq. agcacaaaacatatagggagaggg
rev primer AFB06C08-L
rev primer seq. gtttctccgtaagaagacctgcactca
fluor. primer AFB06C08-F(PET)
dye PET
fluor. Primer seq. PET-agcacaaaacatatagggagaggg
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499484
annotation
similar marker
product size in J 140
product size in Kaizuka-Wase 140
product size in Iki-White 140
product size in Tender Pole 140
Line allele-1 allele-2
C1s-11s-25s-7 144 144
Cho1s-1s-2s-2s-8s 144 144
D1s-15s-10s-8 164 164
F1s-7s-17s-3s-1 170 170
J1s-14s-23s-9 146 146
K1s-5s-2s-2s-4s-5 180 180
Chiang_mai - -
Kaizuka_Wase
Population Linkage Group Position
DJF2 Chr1a 120.7
FA 1a 55.5
KiCF2 1a 151.7
SaT03 1a 91.2
DB Program Definition E-Value
EST Name Species Strain