+Marker Data: AFB05D11

Crop bunching_onion
Population DJF2
Linkage Group Chr6a
Marker Type SSR
Map Position 27.3
Annotation
Source Name AB499480
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2008) Theor Appl Genet 117:1213-1223

motif (tc)3cttatcccttctcaacgctgctt(tc)3cttcttacatgacgtcgcc(tc)13ttctcacatgtatgctttg(ct)3
PCR product (bp) 295
fwd primer AFB05D11-U
fwd primer seq. acttttgataacccacccagtcca
rev primer AFB05D11-L
rev primer seq. gtttccagcgatgaccaattttt
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499480
annotation
similar marker
product size in J 280
product size in Kaizuka-Wase 280
product size in Iki-White
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7
Cho1s-1s-2s-2s-8s 288 288
D1s-15s-10s-8 290 290
F1s-7s-17s-3s-1
J1s-14s-23s-9 295 295
K1s-5s-2s-2s-4s-5 292 292
Chiang_mai
Kaizuka_Wase

Population Linkage Group Position
DJF2 Chr6a 27.3
KiCF2 6a 200.7

DB Program Definition E-Value

EST Name Species Strain