+Marker Data: AFB04B12

Crop bunching_onion
Population DJF2
Linkage Group Chr3b
Marker Type SSR
Map Position 24.5
Annotation
Source Name AB499477
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2007) Euphytica 157:83-94

motif (ac)6(tc)15ttt(tc)3
PCR product (bp) 227
fwd primer AFB04B12-U
fwd primer seq. atagacttgaggggaggatgggtt
rev primer AFB04B12-L
rev primer seq. gtttggagagggcaacatgcatttttag
fluor. primer AFB04B12-F(FAM)
dye FAM
fluor. Primer seq. FAM-atagacttgaggggaggatgggtt
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499477
annotation
similar marker
product size in J 210+230
product size in Kaizuka-Wase
product size in Iki-White
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7 243 243
Cho1s-1s-2s-2s-8s 235 235
D1s-15s-10s-8 235 235
F1s-7s-17s-3s-1 231 239
J1s-14s-23s-9 233 243
K1s-5s-2s-2s-4s-5 233 233
Chiang_mai
Kaizuka_Wase

Population Linkage Group Position
DJF2 Chr3b 24.5
KiCF2 3b 101.4

DB Program Definition E-Value

EST Name Species Strain