+Marker Data: AFB02C10

Crop bunching_onion
Population DJF2
Linkage Group ChrX
Marker Type SSR
Map Position 95.1
Annotation
Source Name AB499471
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2008) Theor Appl Genet 117:1213-1223

motif (ag)3gagtgg(ag)5
PCR product (bp) 300
fwd primer AFB02C10-U
fwd primer seq. attaattgcatgaaggggttagcg
rev primer AFB02C10-L
rev primer seq. gtttccctggatacaatccaatccct
fluor. primer AFB02C10-F(NED)
dye NED
fluor. Primer seq. NED-attaattgcatgaaggggttagcg
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499471
annotation
similar marker
product size in J 280
product size in Kaizuka-Wase 280
product size in Iki-White 280
product size in Tender Pole 280

Line allele-1 allele-2
C1s-11s-25s-7
Cho1s-1s-2s-2s-8s 306 306
D1s-15s-10s-8 310 310
F1s-7s-17s-3s-1
J1s-14s-23s-9 300 300
K1s-5s-2s-2s-4s-5 306 306
Chiang_mai
Kaizuka_Wase

Population Linkage Group Position
DJF2 ChrX 95.1

DB Program Definition E-Value

EST Name Species Strain