+Marker Data: AFB01C03

Crop bunching_onion
Population DJF2
Linkage Group Chr4a
Marker Type SSR
Map Position 45.0
Annotation
Source Name AB499468
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2008) Theor Appl Genet 117:1213-1223

motif (tc)14ttttaagtatttgtaggagtaggc(at)3
PCR product (bp) 129
fwd primer AFB01C03-U
fwd primer seq. atttagccgatacctcaccctcct
rev primer AFB01C03-L
rev primer seq. gtttcgatgatccctattagcatgg
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499468
annotation
similar marker
product size in J 130
product size in Kaizuka-Wase 130
product size in Iki-White
product size in Tender Pole 310

Line allele-1 allele-2
C1s-11s-25s-7
Cho1s-1s-2s-2s-8s
D1s-15s-10s-8 115 115
F1s-7s-17s-3s-1
J1s-14s-23s-9 130 130
K1s-5s-2s-2s-4s-5
Chiang_mai
Kaizuka_Wase

Population Linkage Group Position
DJF2 Chr4a 45.0

DB Program Definition E-Value

EST Name Species Strain