+Marker Data: AFB01A02

Crop bunching_onion
Population DJF2
Linkage Group Chr2a
Marker Type SSR
Map Position 95.3
Annotation
Source Name AB499466
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2008) Theor Appl Genet 117:1213-1223
motif (tg)3aaca(ta)9(tg)17(ag)7
PCR product (bp) 240
fwd primer AFB01A02-U
fwd primer seq. atcaggacatgcacacaagtggtt
rev primer AFB01A02-L
rev primer seq. gtttcaattcaatctgcacctggttgtc
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499466
annotation
similar marker
product size in J 250
product size in Kaizuka-Wase 200
product size in Iki-White 230
product size in Tender Pole
Line allele-1 allele-2
C1s-11s-25s-7
Cho1s-1s-2s-2s-8s
D1s-15s-10s-8 200 200
F1s-7s-17s-3s-1
J1s-14s-23s-9 250 250
K1s-5s-2s-2s-4s-5
Chiang_mai 196 197
Kaizuka_Wase
Population Linkage Group Position
DJF2 Chr2a 95.3
DB Program Definition E-Value
EST Name Species Strain