+Marker Data: AFAT06D09

Crop bunching_onion
Population DJF2
Linkage Group Chr8
Marker Type SSR
Map Position 65.9
Annotation
Source Name AB499460
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2008) Theor Appl Genet 117:1213-1223

motif (ta)9(tg)8gg(tg)6
PCR product (bp) 178
fwd primer AFAT06D09-U
fwd primer seq. atggcctcaagataggggtggttt
rev primer AFAT06D09-L
rev primer seq. gtttcgacttgactccacctaccacac
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499460
annotation
similar marker
product size in J 190
product size in Kaizuka-Wase
product size in Iki-White
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7
Cho1s-1s-2s-2s-8s
D1s-15s-10s-8 180 180
F1s-7s-17s-3s-1
J1s-14s-23s-9 210 210
K1s-5s-2s-2s-4s-5
Chiang_mai
Kaizuka_Wase

Population Linkage Group Position
DJF2 Chr8 65.9

DB Program Definition E-Value

EST Name Species Strain