+Marker Data: AFAT05A03

Crop bunching_onion
Population DJF2
Linkage Group Chr8
Marker Type SSR
Map Position 187.7
Annotation
Source Name AB499453
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2008) Theor Appl Genet 117:1213-1223
motif (ta)3tgtatatgtatatg(ta)7(tg)7ta(tg)4gaaacattccctattaca(tc)5cg(tg)12
PCR product (bp) 239
fwd primer AFAT05A03-U
fwd primer seq. actaatgcatgaacgctgtatagcatatt
rev primer AFAT05A03-L
rev primer seq. gtttgagtaaaatatgagaagaaacatctatgtgc
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499453
annotation
similar marker
product size in J 260
product size in Kaizuka-Wase
product size in Iki-White
product size in Tender Pole
Line allele-1 allele-2
C1s-11s-25s-7 250 250
Cho1s-1s-2s-2s-8s
D1s-15s-10s-8 300 300
F1s-7s-17s-3s-1 340 340
J1s-14s-23s-9 250 250
K1s-5s-2s-2s-4s-5 300 300
Chiang_mai
Kaizuka_Wase
Population Linkage Group Position
DJF2 Chr8 187.7
DB Program Definition E-Value
EST Name Species Strain