+Marker Data: AFAT04G06

Crop bunching_onion
Population DJF2
Linkage Group Chr3a
Marker Type SSR
Map Position 21.1
Annotation
Source Name AB499452
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2008) Theor Appl Genet 117:1213-1223

motif (ta)4t(ac)11g(tg)4
PCR product (bp) 142
fwd primer AFAT04G06-U
fwd primer seq. atcttgggtagtcatctgggaacg
rev primer AFAT04G06-L
rev primer seq. gtttccgaccattcttacttctgcatcc
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499452
annotation
similar marker
product size in J 140
product size in Kaizuka-Wase
product size in Iki-White
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7
Cho1s-1s-2s-2s-8s
D1s-15s-10s-8 120 120
F1s-7s-17s-3s-1
J1s-14s-23s-9 160 160
K1s-5s-2s-2s-4s-5
Chiang_mai
Kaizuka_Wase

Population Linkage Group Position
DJF2 Chr3a 21.1

DB Program Definition E-Value

EST Name Species Strain