+Marker Data: AFAT04E09

Crop bunching_onion
Population DJF2
Linkage Group Chr4b
Marker Type SSR
Map Position 32.9
Annotation
Source Name AB499451
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2008) Theor Appl Genet 117:1213-1223

motif (tg)8(ta)3tgtttgtc(tg)5tttgtccg(tg)4tttgtcc(gt)3
PCR product (bp) 265
fwd primer AFAT04E09-U
fwd primer seq. atagccttttgcgaagcatatgta
rev primer AFAT04E09-L
rev primer seq. gtttggataagtagaaaacaaactgacccg
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499451
annotation
similar marker
product size in J 250
product size in Kaizuka-Wase 270
product size in Iki-White
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7
Cho1s-1s-2s-2s-8s
D1s-15s-10s-8 280 280
F1s-7s-17s-3s-1
J1s-14s-23s-9 270 270
K1s-5s-2s-2s-4s-5
Chiang_mai
Kaizuka_Wase

Population Linkage Group Position
DJF2 Chr4b 32.9

DB Program Definition E-Value

EST Name Species Strain