+Marker Data: AFAT04B03

Crop bunching_onion
Population DJF2
Linkage Group Chr2a
Marker Type SSR
Map Position 154.4
Annotation
Source Name AB499448
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2008) Theor Appl Genet 117:1213-1223

motif (ta)7(tg)22
PCR product (bp) 255
fwd primer AFAT04B03-U
fwd primer seq. acaacaacggtaaccaacgctctaa
rev primer AFAT04B03-L
rev primer seq. gtttcatttcagcataaagtaattttcta
fluor. primer AFAT04B03-F(NED)
dye NED
fluor. Primer seq. NED-acaacaacggtaaccaacgctctaa
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499448
annotation
similar marker
product size in J 240
product size in Kaizuka-Wase
product size in Iki-White
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7
Cho1s-1s-2s-2s-8s 231 231
D1s-15s-10s-8 232 232
F1s-7s-17s-3s-1
J1s-14s-23s-9 251 251
K1s-5s-2s-2s-4s-5 245 245
Chiang_mai 235 235
Kaizuka_Wase

Population Linkage Group Position
DJF2 Chr2a 154.4
KiCF2 2a 147.3
SaT03 2a 137.7

DB Program Definition E-Value

EST Name Species Strain