+Marker Data: AFAT03G10

Crop bunching_onion
Population DJF2
Linkage Group Chr6c
Marker Type SSR
Map Position 0.0
Annotation
Source Name AB499447
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2008) Theor Appl Genet 117:1213-1223

motif (ta)8tgtatgtatgtatgta(tg)7tatgta(tg)6tatgtatgtatg(ta)4tgtatgtatgc(at)3gtata(tg)4
PCR product (bp) 300
fwd primer AFAT03G10-U
fwd primer seq. agtttaggataccaatgaatgctcca
rev primer AFAT03G10-L
rev primer seq. gtttcgcggatatagacaaatatcagataaca
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499447
annotation
similar marker
product size in J
product size in Kaizuka-Wase
product size in Iki-White
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7 340 340
Cho1s-1s-2s-2s-8s
D1s-15s-10s-8 340 340
F1s-7s-17s-3s-1 300 300
J1s-14s-23s-9 300 300
K1s-5s-2s-2s-4s-5 300 300
Chiang_mai 261 261
Kaizuka_Wase

Population Linkage Group Position
DJF2 Chr6c 0.0

DB Program Definition E-Value

EST Name Species Strain