+Marker Data: AFAT03F07

Crop bunching_onion
Population DJF2
Linkage Group Chr7b
Marker Type SSR
Map Position 47.8
Annotation
Source Name AB499446
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2008) Theor Appl Genet 117:1213-1223

motif (ac)8a(ta)6
PCR product (bp) 125
fwd primer AFAT03F07-U
fwd primer seq. ataacgtgtggttgaaaatgcgag
rev primer AFAT03F07-L
rev primer seq. gtttggtgctaaataagggagactacgga
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499446
annotation
similar marker
product size in J 120
product size in Kaizuka-Wase
product size in Iki-White
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7
Cho1s-1s-2s-2s-8s
D1s-15s-10s-8 130 130
F1s-7s-17s-3s-1
J1s-14s-23s-9 170 170
K1s-5s-2s-2s-4s-5
Chiang_mai
Kaizuka_Wase

Population Linkage Group Position
DJF2 Chr7b 47.8

DB Program Definition E-Value

EST Name Species Strain