+Marker Data: AFAT01F03

Crop bunching_onion
Population DJF2
Linkage Group Chr8
Marker Type SSR
Map Position 212.3
Annotation
Source Name AB499443
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2008) Theor Appl Genet 117:1213-1223

motif (ac)11at(ag)9aatt(ac)3gcg(ca)3tgcatgcacg(ca)3att(ac)6
PCR product (bp) 199
fwd primer AFAT01F03-U
fwd primer seq. atgacatagacccttttgtaggaggaaa
rev primer AFAT01F03-L
rev primer seq. gtttgcatacatacatacatacgcatatacatacaa
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499443
annotation
similar marker
product size in J 200
product size in Kaizuka-Wase
product size in Iki-White 200+210
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7 220 220
Cho1s-1s-2s-2s-8s
D1s-15s-10s-8 210 210
F1s-7s-17s-3s-1 220 220
J1s-14s-23s-9 200 200
K1s-5s-2s-2s-4s-5 215 215
Chiang_mai - -
Kaizuka_Wase

Population Linkage Group Position
DJF2 Chr8 212.3
KiCF2 8b 26.7
SaT03 8b 1.8

DB Program Definition E-Value

EST Name Species Strain