Crop | bunching_onion |
---|---|
Population | DJF2 |
Linkage Group | Chr8 |
Marker Type | SSR |
Map Position | 212.3 |
Annotation | |
Source Name | AB499443 |
Source Type | genomic |
Source Sequence | |
Developer | NIVTS |
Document | Tsukazaki et al. (2008) Theor Appl Genet 117:1213-1223 |
motif | (ac)11at(ag)9aatt(ac)3gcg(ca)3tgcatgcacg(ca)3att(ac)6 |
---|---|
PCR product (bp) | 199 |
fwd primer | AFAT01F03-U |
fwd primer seq. | atgacatagacccttttgtaggaggaaa |
rev primer | AFAT01F03-L |
rev primer seq. | gtttgcatacatacatacatacgcatatacatacaa |
fluor. primer | |
dye | |
fluor. Primer seq. | |
PCR condition | 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C |
polymerase | Toyobo rTaq DNA polymerase |
Genebank No. | AB499443 |
annotation | |
similar marker | |
product size in J | 200 |
product size in Kaizuka-Wase | |
product size in Iki-White | 200+210 |
product size in Tender Pole |
Line | allele-1 | allele-2 |
---|---|---|
C1s-11s-25s-7 | 220 | 220 |
Cho1s-1s-2s-2s-8s | ||
D1s-15s-10s-8 | 210 | 210 |
F1s-7s-17s-3s-1 | 220 | 220 |
J1s-14s-23s-9 | 200 | 200 |
K1s-5s-2s-2s-4s-5 | 215 | 215 |
Chiang_mai | - | - |
Kaizuka_Wase |
Population | Linkage Group | Position |
---|---|---|
DJF2 | Chr8 | 212.3 |
KiCF2 | 8b | 26.7 |
SaT03 | 8b | 1.8 |
DB | Program | Definition | E-Value |
---|
EST Name | Species | Strain |
---|