+Marker Data: AFAA05H04

Crop bunching_onion
Population DJF2
Linkage Group Chr8
Marker Type SSR
Map Position 140.7
Annotation
Source Name AB499438
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2008) Theor Appl Genet 117:1213-1223

motif (ta)4ggtgtactag(tg)9tatacatatgtattacacttagg(ta)3
PCR product (bp) 246
fwd primer AFAA05H04-U
fwd primer seq. acaagttatagaaaacattgtgaactctttagtg
rev primer AFAA05H04-L
rev primer seq. gtttgcctccctccacctcatc
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499438
annotation
similar marker
product size in J 260
product size in Kaizuka-Wase
product size in Iki-White
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7 260 260
Cho1s-1s-2s-2s-8s 260 260
D1s-15s-10s-8 280 280
F1s-7s-17s-3s-1 270 270
J1s-14s-23s-9 260 260
K1s-5s-2s-2s-4s-5 256 256
Chiang_mai
Kaizuka_Wase

Population Linkage Group Position
DJF2 Chr8 140.7

DB Program Definition E-Value

EST Name Species Strain