+Marker Data: AFAA03F01

Crop bunching_onion
Population DJF2
Linkage Group Chr7a
Marker Type SSR
Map Position 20.0
Annotation
Source Name AB499434
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2007) Euphytica 157:83-94
motif (ac)8
PCR product (bp) 226
fwd primer AFAA03F01-U
fwd primer seq. agactttgtttctcgctcttggtt
rev primer AFAA03F01-L
rev primer seq. gtttaaattgcacaaggctctgcgagat
fluor. primer AFAA03F01-F(PET)
dye PET
fluor. Primer seq. PET-agactttgtttctcgctcttggtt
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499434
annotation
similar marker
product size in J 220
product size in Kaizuka-Wase 300
product size in Iki-White 300
product size in Tender Pole 210
Line allele-1 allele-2
C1s-11s-25s-7 233 233
Cho1s-1s-2s-2s-8s 233 233
D1s-15s-10s-8 231 231
F1s-7s-17s-3s-1 231 231
J1s-14s-23s-9 235 235
K1s-5s-2s-2s-4s-5 233 233
Chiang_mai 357 351
Kaizuka_Wase
Population Linkage Group Position
DJF2 Chr7a 20.0
DB Program Definition E-Value
EST Name Species Strain