+Marker Data: AFAA00A02

Crop bunching_onion
Population DJF2
Linkage Group Chr1a
Marker Type SSR
Map Position 207.3
Annotation
Source Name AB499430
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2008) Theor Appl Genet 117:1213-1223

motif (ca)5atacat(ac)4atacatgcatatatgt(ac)6
PCR product (bp) 210
fwd primer AFAA00A02-U
fwd primer seq. acagagttttcatacttaaaggatttttgg
rev primer AFAA00A02-L
rev primer seq. gtttcgatagaaaaatgcatagttggaaatg
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499430
annotation
similar marker
product size in J 210
product size in Kaizuka-Wase
product size in Iki-White
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7
Cho1s-1s-2s-2s-8s
D1s-15s-10s-8 220 220
F1s-7s-17s-3s-1
J1s-14s-23s-9 210 210
K1s-5s-2s-2s-4s-5
Chiang_mai - -
Kaizuka_Wase

Population Linkage Group Position
DJF2 Chr1a 207.3

DB Program Definition E-Value

EST Name Species Strain