+Marker Data: AFA18C11

Crop bunching_onion
Population DJF2
Linkage Group Chr8
Marker Type SSR
Map Position 42.3
Annotation
Source Name AB499424
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2008) Theor Appl Genet 117:1213-1223

motif (ac)13a(ta)8
PCR product (bp) 276
fwd primer AFA18C11-U
fwd primer seq. atcgacagaaatttcggcgagtta
rev primer AFA18C11-L
rev primer seq. gtttagggtcatgcactattatgcggg
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499424
annotation
similar marker
product size in J
product size in Kaizuka-Wase
product size in Iki-White
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7
Cho1s-1s-2s-2s-8s
D1s-15s-10s-8 230 230
F1s-7s-17s-3s-1
J1s-14s-23s-9 228 228
K1s-5s-2s-2s-4s-5
Chiang_mai
Kaizuka_Wase

Population Linkage Group Position
DJF2 Chr8 42.3

DB Program Definition E-Value

EST Name Species Strain