+Marker Data: AFA18C03

Crop bunching_onion
Population DJF2
Linkage Group Chr2a
Marker Type SSR
Map Position 122.6
Annotation
Source Name AB499423
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2008) Theor Appl Genet 117:1213-1223

motif (ac)5(tc)5(ac)9tatacatataaat(ac)6agag(ac)9a(ta)3t(ag)5
PCR product (bp) 277
fwd primer AFA18C03-U
fwd primer seq. attttgtgtccaaatggtcatccc
rev primer AFA18C03-L
rev primer seq. gtttcacctgcatgggcactttaatttt
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499423
annotation
similar marker
product size in J 200+270
product size in Kaizuka-Wase 250
product size in Iki-White 300
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7
Cho1s-1s-2s-2s-8s
D1s-15s-10s-8 250 250
F1s-7s-17s-3s-1
J1s-14s-23s-9 260 260
K1s-5s-2s-2s-4s-5
Chiang_mai 280 282
Kaizuka_Wase

Population Linkage Group Position
DJF2 Chr2a 122.6

DB Program Definition E-Value

EST Name Species Strain