+Marker Data: AFA17A05

Crop bunching_onion
Population DJF2
Linkage Group Chr8
Marker Type SSR
Map Position 216.5
Annotation
Source Name AB499422
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2007) Euphytica 157:83-94

motif (tg)22
PCR product (bp) 178
fwd primer AFA17A05-U
fwd primer seq. atccatcaattacactgccagcac
rev primer AFA17A05-L
rev primer seq. gtttgctgaacttggtatgttgatactcca
fluor. primer AFA17A05-F(NED)
dye NED
fluor. Primer seq. NED-atccatcaattacactgccagcac
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499422
annotation
similar marker
product size in J
product size in Kaizuka-Wase
product size in Iki-White
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7 151 183
Cho1s-1s-2s-2s-8s 151 161
D1s-15s-10s-8 151 161
F1s-7s-17s-3s-1 151 161
J1s-14s-23s-9 151 183
K1s-5s-2s-2s-4s-5 151 181
Chiang_mai
Kaizuka_Wase

Population Linkage Group Position
DJF2 Chr8 216.5
KiCF2 8b 40.3

DB Program Definition E-Value

EST Name Species Strain