+Marker Data: AFA15D09

Crop bunching_onion
Population DJF2
Linkage Group Chr4b
Marker Type SSR
Map Position 91.4
Annotation
Source Name AB499417
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2008) Theor Appl Genet 117:1213-1223

motif (ac)11
PCR product (bp) 177
fwd primer AFA15D09-U
fwd primer seq. agtagaacaaacgcattgactagaa
rev primer AFA15D09-L
rev primer seq. gtttcaccggtggggtaaactcattaga
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499417
annotation
similar marker
product size in J 190
product size in Kaizuka-Wase 180+190
product size in Iki-White 180+190
product size in Tender Pole 190

Line allele-1 allele-2
C1s-11s-25s-7 167 167
Cho1s-1s-2s-2s-8s 167 181
D1s-15s-10s-8 173 173
F1s-7s-17s-3s-1 169 169
J1s-14s-23s-9 185 185
K1s-5s-2s-2s-4s-5 170 170
Chiang_mai 167 182
Kaizuka_Wase

Population Linkage Group Position
DJF2 Chr4b 91.4

DB Program Definition E-Value

EST Name Species Strain