+Marker Data: AFA14E06

Crop bunching_onion
Population DJF2
Linkage Group Chr3a
Marker Type SSR
Map Position 61.3
Annotation
Source Name AB499414
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2007) Euphytica 157:83-94
motif (ac)3attcatcc(ac)10
PCR product (bp) 217
fwd primer AFA14E06-U
fwd primer seq. acacaacatgctgctccagatcttact
rev primer AFA14E06-L
rev primer seq. gtttgaagatagcaccgtttgagagagtg
fluor. primer AFA14E06-F(VIC)
dye VIC
fluor. Primer seq. VIC-acacaacatgctgctccagatcttact
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499414
annotation
similar marker
product size in J 210
product size in Kaizuka-Wase 200
product size in Iki-White 200
product size in Tender Pole 200
Line allele-1 allele-2
C1s-11s-25s-7 209 209
Cho1s-1s-2s-2s-8s 209 209
D1s-15s-10s-8 209 209
F1s-7s-17s-3s-1 209 209
J1s-14s-23s-9 217 217
K1s-5s-2s-2s-4s-5 209 209
Chiang_mai - -
Kaizuka_Wase
Population Linkage Group Position
DJF2 Chr3a 61.3
DB Program Definition E-Value
EST Name Species Strain