+Marker Data: AFA11H10

Crop bunching_onion
Population DJF2
Linkage Group Chr4b
Marker Type SSR
Map Position 16.2
Annotation
Source Name AB499411
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2008) Theor Appl Genet 117:1213-1223

motif (tg)11ttcgcgcatg(ta)3
PCR product (bp) 261
fwd primer AFA11H10-U
fwd primer seq. atcttttgtgtgttgtcaccgcat
rev primer AFA11H10-L
rev primer seq. gtttgcaaagtgcaaagcaactcaacat
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499411
annotation
similar marker
product size in J 230
product size in Kaizuka-Wase
product size in Iki-White
product size in Tender Pole 200

Line allele-1 allele-2
C1s-11s-25s-7
Cho1s-1s-2s-2s-8s
D1s-15s-10s-8 230 230
F1s-7s-17s-3s-1
J1s-14s-23s-9 260 260
K1s-5s-2s-2s-4s-5
Chiang_mai - -
Kaizuka_Wase

Population Linkage Group Position
DJF2 Chr4b 16.2

DB Program Definition E-Value

EST Name Species Strain