+Marker Data: AFA11G08

Crop bunching_onion
Population SaT03
Linkage Group 5b
Marker Type SSR
Map Position 0.0
Annotation
Source Name AB564828
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2011) Theor Appl Genet 122:501-510

motif (ac)12gaatacaaattaaaaat(ac)3
PCR product (bp) 233
fwd primer AFA11G08-U
fwd primer seq. acaaccaaacctatcaagctgatctatcta
rev primer AFA11G08-L
rev primer seq. gtttattcagcgattgtgtagtttcttcc
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB564828
annotation
similar marker
product size in J 230
product size in Kaizuka-Wase 220
product size in Iki-White 240
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7 166 166
Cho1s-1s-2s-2s-8s 166 166
D1s-15s-10s-8 164 164
F1s-7s-17s-3s-1 166 166
J1s-14s-23s-9 160 166
K1s-5s-2s-2s-4s-5 168 168
Chiang_mai 228 228
Kaizuka_Wase

Population Linkage Group Position
SaT03 5b 0.0

DB Program Definition E-Value

EST Name Species Strain