+Marker Data: AFA11G05

Crop bunching_onion
Population KiCF2
Linkage Group 5a
Marker Type SSR
Map Position 0.0
Annotation
Source Name AB795053
Source Type genomic
Source Sequence
Developer NIVTS
Document Wako et al. (2016)

motif (ta)5(tg)11
PCR product (bp) 238
fwd primer AFA11G05-U
fwd primer seq. agtcaggagcaacccaaacattac
rev primer AFA11G05-L
rev primer seq. gtttcctttaccaccatacctgattttg
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB795053
annotation
similar marker
product size in J
product size in Kaizuka-Wase
product size in Iki-White
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7
Cho1s-1s-2s-2s-8s 240 240
D1s-15s-10s-8
F1s-7s-17s-3s-1
J1s-14s-23s-9
K1s-5s-2s-2s-4s-5 238 238
Chiang_mai 200 200
Kaizuka_Wase

Population Linkage Group Position
KiCF2 5a 0.0

DB Program Definition E-Value

EST Name Species Strain