+Marker Data: AFA10G11

Crop bunching_onion
Population DJF2
Linkage Group Chr1b
Marker Type SSR
Map Position 121.5
Annotation
Source Name AB499406
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2007) Euphytica 157:83-94

motif (tg)9(ta)3tgttttactacatcatg(ta)3
PCR product (bp) 143
fwd primer AFA10G11-U
fwd primer seq. atggttgatggtcatctccatttg
rev primer AFA10G11-L
rev primer seq. gtttgcagcataaccaaattgtcca
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499406
annotation
similar marker
product size in J 130
product size in Kaizuka-Wase 130+140
product size in Iki-White
product size in Tender Pole 130

Line allele-1 allele-2
C1s-11s-25s-7
Cho1s-1s-2s-2s-8s
D1s-15s-10s-8 150 150
F1s-7s-17s-3s-1
J1s-14s-23s-9 160 160
K1s-5s-2s-2s-4s-5
Chiang_mai 300 330
Kaizuka_Wase

Population Linkage Group Position
DJF2 Chr1b 121.5

DB Program Definition E-Value

EST Name Species Strain