Crop | bunching_onion |
---|---|
Population | DJF2 |
Linkage Group | ChrX |
Marker Type | SSR |
Map Position | 11.5 |
Annotation | |
Source Name | AB499403 |
Source Type | genomic |
Source Sequence | |
Developer | NIVTS |
Document | Tsukazaki et al. (2007) Euphytica 157:83-94 |
motif | (ac)22a(ta)7 |
---|---|
PCR product (bp) | 249 |
fwd primer | AFA10C07-U |
fwd primer seq. | acaacattgcaaacatgtcacaca |
rev primer | AFA10C07-L |
rev primer seq. | gtttgcactgagtttgcgttgagcta |
fluor. primer | AFA10C07-F(NED) |
dye | NED |
fluor. Primer seq. | NED-acaacattgcaaacatgtcacaca |
PCR condition | 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C |
polymerase | Toyobo rTaq DNA polymerase |
Genebank No. | AB499403 |
annotation | |
similar marker | |
product size in J | 250 |
product size in Kaizuka-Wase | |
product size in Iki-White | |
product size in Tender Pole |
Line | allele-1 | allele-2 |
---|---|---|
C1s-11s-25s-7 | 237 | 247 |
Cho1s-1s-2s-2s-8s | 247 | 247 |
D1s-15s-10s-8 | 247 | 261 |
F1s-7s-17s-3s-1 | 253 | 253 |
J1s-14s-23s-9 | 249 | 249 |
K1s-5s-2s-2s-4s-5 | 255 | 255 |
Chiang_mai | - | - |
Kaizuka_Wase |
Population | Linkage Group | Position |
---|---|---|
DJF2 | ChrX | 11.5 |
KiCF2 | 5b | 27.5 |
DB | Program | Definition | E-Value |
---|
EST Name | Species | Strain |
---|