+Marker Data: AFA07H05

Crop bunching_onion
Population DJF2
Linkage Group Chr7a
Marker Type SSR
Map Position 64.0
Annotation
Source Name AB499389
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2008) Theor Appl Genet 117:1213-1223

motif (tg)11ca(tg)3cgct(tg)3tatgtg(ta)5
PCR product (bp) 295
fwd primer AFA07H05-U
fwd primer seq. atggttatttcttgagtggagggg
rev primer AFA07H05-L
rev primer seq. gtttcccgatcgatgagaataggcatac
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499389
annotation
similar marker
product size in J 280
product size in Kaizuka-Wase
product size in Iki-White
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7
Cho1s-1s-2s-2s-8s
D1s-15s-10s-8 310 310
F1s-7s-17s-3s-1
J1s-14s-23s-9 300 300
K1s-5s-2s-2s-4s-5
Chiang_mai
Kaizuka_Wase

Population Linkage Group Position
DJF2 Chr7a 64.0

DB Program Definition E-Value

EST Name Species Strain