+Marker Data: AFA06A08

Crop bunching_onion
Population DJF2
Linkage Group Chr7b
Marker Type SSR
Map Position 30.7
Annotation
Source Name AB499376
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2007) Euphytica 157:83-94

motif (ac)6atatacatacat(ac)10atataca(ta)4
PCR product (bp) 179
fwd primer AFA06A08-U
fwd primer seq. actcaggagaggggtattttggtt
rev primer AFA06A08-L
rev primer seq. gtttgggaaaggcttctcttgaggt
fluor. primer AFA06A08-F(VIC)
dye VIC
fluor. Primer seq. VIC-actcaggagaggggtattttggtt
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499376
annotation
similar marker
product size in J 190
product size in Kaizuka-Wase
product size in Iki-White
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7 178 178
Cho1s-1s-2s-2s-8s 190 190
D1s-15s-10s-8 184 184
F1s-7s-17s-3s-1 176 176
J1s-14s-23s-9 176 190
K1s-5s-2s-2s-4s-5 188 188
Chiang_mai
Kaizuka_Wase

Population Linkage Group Position
DJF2 Chr7b 30.7
FA 7c 29.4
KiCF2 7b 138.6
SaT03 7b 0.0

DB Program Definition E-Value

EST Name Species Strain