Crop | bunching_onion |
---|---|
Population | SaT03 |
Linkage Group | 1b |
Marker Type | SSR |
Map Position | 0.0 |
Annotation | |
Source Name | AB564797 |
Source Type | genomic |
Source Sequence | |
Developer | NIVTS |
Document | Tsukazaki et al. (2011) Theor Appl Genet 122:501-510 |
motif | (ac)6aa(ac)11a(ta)3tcatatcct(ta)3 |
---|---|
PCR product (bp) | 215 |
fwd primer | AFA05F04-U |
fwd primer seq. | agcatgtatctcgtcttggcaca |
rev primer | AFA05F04-L |
rev primer seq. | gtttccttttgatggtatttgtaactagatgttt |
fluor. primer | |
dye | |
fluor. Primer seq. | |
PCR condition | 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C |
polymerase | Toyobo rTaq DNA polymerase |
Genebank No. | AB564797 |
annotation | |
similar marker | |
product size in J | 210 |
product size in Kaizuka-Wase | |
product size in Iki-White | |
product size in Tender Pole |
Line | allele-1 | allele-2 |
---|---|---|
C1s-11s-25s-7 | 251 | 251 |
Cho1s-1s-2s-2s-8s | 211 | 211 |
D1s-15s-10s-8 | 203 | 203 |
F1s-7s-17s-3s-1 | 201 | 201 |
J1s-14s-23s-9 | 203 | 205 |
K1s-5s-2s-2s-4s-5 | 203 | 203 |
Chiang_mai | - | - |
Kaizuka_Wase |
Population | Linkage Group | Position |
---|---|---|
KiCF2 | 1b | 101.9 |
SaT03 | 1b | 0.0 |
DB | Program | Definition | E-Value |
---|
EST Name | Species | Strain |
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