+Marker Data: AFA05D02

Crop bunching_onion
Population DJF2
Linkage Group Chr2a
Marker Type SSR
Map Position 28.0
Annotation
Source Name AB499371
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2008) Theor Appl Genet 117:1213-1223

motif (ac)10a(ta)5
PCR product (bp) 294
fwd primer AFA05D02-U
fwd primer seq. atactcgaagcaatactcgggaac
rev primer AFA05D02-L
rev primer seq. gtttgaatgctttgttgcacttgtttgg
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499371
annotation
similar marker
product size in J
product size in Kaizuka-Wase
product size in Iki-White
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7
Cho1s-1s-2s-2s-8s
D1s-15s-10s-8 271 271
F1s-7s-17s-3s-1
J1s-14s-23s-9 301 301
K1s-5s-2s-2s-4s-5
Chiang_mai
Kaizuka_Wase

Population Linkage Group Position
DJF2 Chr2a 28.0

DB Program Definition E-Value

EST Name Species Strain