+Marker Data: AFA04H02

Crop bunching_onion
Population DJF2
Linkage Group Chr1b
Marker Type SSR
Map Position 17.8
Annotation
Source Name AB499369
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2008) Theor Appl Genet 117:1213-1223

motif (aat)3attttattttgcttgtaa(ac)5at(ac)12a(ta)4
PCR product (bp) 260
fwd primer AFA04H02-U
fwd primer seq. agtgatgtgctcatgagtgagttg
rev primer AFA04H02-L
rev primer seq. gtttgcgacaagatgacaagacttatg
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499369
annotation
similar marker
product size in J 240
product size in Kaizuka-Wase
product size in Iki-White
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7
Cho1s-1s-2s-2s-8s
D1s-15s-10s-8 270 290
F1s-7s-17s-3s-1 270 270
J1s-14s-23s-9 280 280
K1s-5s-2s-2s-4s-5 280 280
Chiang_mai - -
Kaizuka_Wase

Population Linkage Group Position
DJF2 Chr1b 17.8

DB Program Definition E-Value

EST Name Species Strain