+Marker Data: AFA03D03

Crop bunching_onion
Population DJF2
Linkage Group Chr3b
Marker Type SSR
Map Position 47.2
Annotation
Source Name AB499362
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2008) Theor Appl Genet 117:1213-1223

motif (ta)3catgta(tg)8ca(tg)7ta(tg)3
PCR product (bp) 177
fwd primer AFA03D03-U
fwd primer seq. agtccaaagcagtgttagctggaa
rev primer AFA03D03-L
rev primer seq. gtttccaagcacatgaaagtgcacaag
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499362
annotation
similar marker
product size in J 190
product size in Kaizuka-Wase 190+200
product size in Iki-White
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7
Cho1s-1s-2s-2s-8s
D1s-15s-10s-8 183 183
F1s-7s-17s-3s-1
J1s-14s-23s-9 177 177
K1s-5s-2s-2s-4s-5
Chiang_mai
Kaizuka_Wase

Population Linkage Group Position
DJF2 Chr3b 47.2

DB Program Definition E-Value

EST Name Species Strain