+Marker Data: AFA03B03

Crop bunching_onion
Population DJF2
Linkage Group Chr2b
Marker Type SSR
Map Position 63.1
Annotation
Source Name AB499359
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2008) Theor Appl Genet 117:1213-1223

motif (at)3gaa(ta)6(tg)6ta(tg)6
PCR product (bp) 233
fwd primer AFA03B03-U
fwd primer seq. atgtgaagttgagttcgttggcag
rev primer AFA03B03-L
rev primer seq. gtttggcattacccagtagtgtccttgg
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499359
annotation
similar marker
product size in J 230
product size in Kaizuka-Wase 230
product size in Iki-White
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7
Cho1s-1s-2s-2s-8s
D1s-15s-10s-8 230 230
F1s-7s-17s-3s-1
J1s-14s-23s-9 240 240
K1s-5s-2s-2s-4s-5
Chiang_mai 400 400
Kaizuka_Wase

Population Linkage Group Position
DJF2 Chr2b 63.1

DB Program Definition E-Value

EST Name Species Strain