+Marker Data: AFA03A05

Crop bunching_onion
Population DJF2
Linkage Group Chr5
Marker Type SSR
Map Position 96.5
Annotation
Source Name AB499358
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2008) Theor Appl Genet 117:1213-1223

motif (ta)10(tg)12
PCR product (bp) 197
fwd primer AFA03A05-U
fwd primer seq. acaaaaacatatttgattacatgacgttatactt
rev primer AFA03A05-L
rev primer seq. gttttcatcatctccccctcgtc
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499358
annotation
similar marker
product size in J 220
product size in Kaizuka-Wase
product size in Iki-White
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7 190 190
Cho1s-1s-2s-2s-8s
D1s-15s-10s-8 190 190
F1s-7s-17s-3s-1
J1s-14s-23s-9 210 210
K1s-5s-2s-2s-4s-5 210 210
Chiang_mai - -
Kaizuka_Wase

Population Linkage Group Position
DJF2 Chr5 96.5

DB Program Definition E-Value

EST Name Species Strain