+Marker Data: AFA01H09

Crop bunching_onion
Population DJF2
Linkage Group Chr5
Marker Type SSR
Map Position 9.6
Annotation
Source Name AB499350
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2008) Theor Appl Genet 117:1213-1223

motif (ta)3(tg)16tt(ca)3tg(ta)3
PCR product (bp) 142
fwd primer AFA01H09-U
fwd primer seq. atctgtttgcttggaatgaagtcg
rev primer AFA01H09-L
rev primer seq. gtttcagaggtgacagcagagcatc
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499350
annotation
similar marker
product size in J
product size in Kaizuka-Wase
product size in Iki-White
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7
Cho1s-1s-2s-2s-8s
D1s-15s-10s-8 100 150
F1s-7s-17s-3s-1 100 135
J1s-14s-23s-9 100 130
K1s-5s-2s-2s-4s-5
Chiang_mai
Kaizuka_Wase

Population Linkage Group Position
DJF2 Chr5 9.6

DB Program Definition E-Value

EST Name Species Strain